Introduction
  • Introduction
  • Course Outline
  • Getting Set Up: Chimera
  • Getting Set Up: PyMOL
  • Section 1 Recap
Protein Structures and Databases
  • Protein Basics
  • Intro to X-Ray Crystallography
  • Intro to NMR Spectroscopy
  • RCSB PDB Database
  • Section 2 Recap
Homology Modeling
  • Intro to Homology Modeling
  • Modeling with Swiss-model
  • Modeling with Phyre2.0
  • Verifying Structures with QMEAN
  • Section 3 Recap
Molecular Docking
  • Intro to Docking
  • Docking with SPOT-Ligand2
  • Exploring the ZINC Database
  • Section 4 Recap
Course Culmination
  • Future Steps
  • Course Conclusion
  • Content Copyright and Acknowledgements
BONUS #1: Docking with DOCK6
  • Intro to DOCK6
  • Installing DOCK6
  • Protein Preparation
  • Surface Sphere Generation
  • Grid Generation
  • Docking